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540 lines
16 KiB
540 lines
16 KiB
%{!?python_sitearch: %global python_sitearch %(%{__python} -c "from distutils.sysconfig import get_python_lib; print get_python_lib(1)")} |
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Summary: A high-performance implementation of MPI |
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Name: mpich |
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Version: 3.2 |
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Release: 2%{?dist} |
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License: MIT |
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Group: Development/Libraries |
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URL: http://www.mpich.org |
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Source0: http://www.mpich.org/static/downloads/%{version}/%{name}-%{version}.tar.gz |
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Source1: mpich.macros.in |
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Source2: mpich.module.in |
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Patch1: https://trac.mpich.org/projects/mpich/raw-attachment/ticket/2299/0001-pm-remshell-include-MPL-when-linking.patch |
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Patch2: 0002-pm-gforker-include-MPL-when-linking.patch |
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Patch3: 0003-soften-version-check.patch |
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Patch4: 0001-hydra-improve-localhost-detection.patch |
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Patch5: 0001-Revert-require-automake-1.15.patch |
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Patch6: 0002-Revert-require-libtool-2.4.3.patch |
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Patch7: 0003-unbundle-YAML-Tiny.patch |
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Patch8: 0004-unbundle-hwloc-from-hydra.patch |
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# Source100 derived from |
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# Source100: http://www.mpich.org/static/downloads/3.0.4/mpich-3.0.4.tar.gz |
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# by |
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# rm -r src/mpid/pamid |
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# vi src/mpid/Makefile* |
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# and remove references to pamid |
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# rm -r src/mpid/ch3/channels/nemesis/netmod/scif |
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# vi src/src/mpid/ch3/channels/nemesis/netmod/Makefile* |
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# and remove references to scif |
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# rm -r src/pm/hydra/tools/topo/hwloc/hwloc |
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# vi src/pm/hydra/tools/topo/hwloc/Makefile.mk |
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# and remove references to hwloc |
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# rm `find * -name 'Makefile.in' -print | grep -v doc/ | grep -v src/mpi/romio/mpi2-other/` |
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# rm -r contrib www |
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# rm src/mpi/romio/test/external32.c |
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# rm `find * -name ar-lib -o -name compile -o -name config.guess -o -name config.sub -o -name depcomp -o -name missing -o -name configure -o -name .state-cache -o -name aclocal.mp -o -name libtool.m4` |
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# rm README.envvar maint/createcoverage maint/getcoverage src/include/mpichconf.h.in src/include/mpich_param_vals.h src/pm/hydra/include/hydra_config.h.in src/util/logging/common/state_names.h src/util/param/param_vals.c subsys_include.m4 |
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# more extensive changes need to actually build are included in the mpich-3.0.4-rh.patch file |
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Source100: mpich-3.0.4-rh.tar.gz |
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Patch100: mpich-3.0.4-rh.patch |
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BuildRequires: libXt-devel, bison, flex, libuuid-devel |
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BuildRequires: gcc-c++ gcc-gfortran |
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BuildRequires: hwloc-devel >= 1.5 |
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BuildRequires: perl, python, perl-Digest-MD5, perl-YAML-Tiny |
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BuildRequires: automake autoconf libtool gettext |
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%ifnarch s390 |
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BuildRequires: valgrind-devel |
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%endif |
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%global common_desc MPICH is a high-performance and widely portable implementation of the Message\ |
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Passing Interface (MPI) standard (MPI-1, MPI-2 and MPI-3). The goals of MPICH\ |
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are: (1) to provide an MPI implementation that efficiently supports different\ |
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computation and communication platforms including commodity clusters (desktop\ |
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systems, shared-memory systems, multicore architectures), high-speed networks\ |
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(10 Gigabit Ethernet, InfiniBand, Myrinet, Quadrics) and proprietary high-end\ |
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computing systems (Blue Gene, Cray) and (2) to enable cutting-edge research in\ |
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MPI through an easy-to-extend modular framework for other derived\ |
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implementations.\ |
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\ |
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The mpich binaries in this RPM packages were configured to use the default\ |
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process manager (Hydra) using the default device (ch3). The ch3 device\ |
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was configured with support for the nemesis channel that allows for\ |
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shared-memory and TCP/IP sockets based communication. |
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%description |
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%{common_desc} |
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%package 3.2 |
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Summary: A high-performance implementation of MPI |
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Group: Development/Libraries |
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Obsoletes: mpich2 < 1.5-4 |
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Obsoletes: mpich-libs < 1.1.1 |
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Obsoletes: mpich-mpd < 1.4.1 |
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Obsoletes: mpich < 3.0.4-9 |
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Provides: mpi |
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Requires: environment-modules |
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%description 3.2 |
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%{common_desc} |
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%package 3.2-autoload |
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Summary: Load mpich 3.2 automatically into profile |
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Group: System Environment/Base |
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Requires: mpich-3.2 = %{version}-%{release} |
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%description 3.2-autoload |
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This package contains profile files that make mpich 3.2 automatically loaded. |
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%package 3.2-devel |
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Summary: Development files for mpich-3.2 |
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Group: Development/Libraries |
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Provides: mpi-devel |
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Obsoletes: mpich-devel < 3.0.4-9 |
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Requires: mpich-3.2 = %{version}-%{release} |
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Requires: pkgconfig |
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Requires: gcc-gfortran |
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%description 3.2-devel |
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Contains development headers and libraries for mpich 3.2. |
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|
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%package 3.2-doc |
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Summary: Documentations and examples for mpich 3.2 |
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Group: Documentation |
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BuildArch: noarch |
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Obsoletes: mpich-doc < 3.0.4-9 |
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Requires: mpich-3.2-devel = %{version}-%{release} |
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%description 3.2-doc |
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Contains documentations, examples and manpages for mpich 3.2. |
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%package 3.0 |
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Summary: MPICH 3.0.x implementation of MPI |
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Group: Development/Libraries |
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Version: 3.0.4 |
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Release: 10%{?dist} |
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Obsoletes: mpich2 < 1.5-4 |
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Obsoletes: mpich-libs < 1.1.1 |
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Obsoletes: mpich-mpd < 1.4.1 |
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Obsoletes: mpich < 3.0.4-9 |
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Provides: mpi |
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Provides: mpich = %{version}-%{release} |
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Provides: mpich%{?_isa} = %{version}-%{release} |
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Requires: environment-modules |
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|
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%description 3.0 |
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%{common_desc} |
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This package provides compatibility for applications compiled with MPICH 3.0.4. |
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%package 3.0-autoload |
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Summary: Load mpich 3.0 automatically into profile |
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Group: System Environment/Base |
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Version: %{version} |
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Release: %{release} |
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Obsoletes: mpich-autoload < 3.0.4-9 |
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Provides: mpich-autoload = %{version}-%{release} |
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Requires: mpich-3.0 = %{version}-%{release} |
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%description 3.0-autoload |
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This package contains profile files that make mpich 3.0 automatically loaded. |
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%package 3.0-devel |
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Summary: Development files for mpich-3.0 |
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Group: Development/Libraries |
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Version: %{version} |
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Release: %{release} |
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Provides: mpi-devel |
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Obsoletes: mpich-devel < 3.0.4-9 |
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Provides: mpich-devel = %{version}-%{release} |
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Requires: mpich-3.0 = %{version}-%{release} |
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Requires: pkgconfig |
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Requires: gcc-gfortran |
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%description 3.0-devel |
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Contains development headers and libraries for mpich 3.0. |
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|
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%package 3.0-doc |
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Summary: Documentations and examples for mpich 3.0 |
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Group: Documentation |
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Version: %{version} |
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Release: %{release} |
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BuildArch: noarch |
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Obsoletes: mpich-doc < 3.0.4-9 |
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Provides: mpich-doc = %{version}-%{release} |
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Requires: mpich-3.0-devel = %{version}-%{release} |
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%description 3.0-doc |
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Contains documentations, examples and manpages for mpich 3.0. |
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# We only compile with gcc, but other people may want other compilers. |
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# Set the compiler here. |
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%{!?opt_cc: %global opt_cc gcc} |
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%{!?opt_fc: %global opt_fc gfortran} |
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%{!?opt_f77: %global opt_f77 gfortran} |
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# Optional CFLAGS to use with the specific compiler...gcc doesn't need any, |
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# so uncomment and undefine to NOT use |
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%{!?opt_cc_cflags: %global opt_cc_cflags %{optflags}} |
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%{!?opt_fc_fflags: %global opt_fc_fflags %{optflags}} |
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#%{!?opt_fc_fflags: %global opt_fc_fflags %{optflags} -I%{_fmoddir}} |
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%{!?opt_f77_fflags: %global opt_f77_fflags %{optflags}} |
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%prep |
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%setup -q -b 100 |
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%patch1 -p1 |
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%patch2 -p1 |
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%patch3 -p1 |
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%patch4 -p1 |
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%patch5 -p1 |
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%patch6 -p1 |
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%patch7 -p1 |
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%patch8 -p1 |
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# bundled knem module |
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rm -r contrib/ |
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# bundled YAML::Tiny |
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rm -r maint/local_perl/ |
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# bundled hwloc |
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rm -r src/pm/hydra/tools/topo/hwloc/hwloc/ |
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# HTML manpages |
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rm -r www/ |
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./autogen.sh |
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cd .. |
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cd mpich-3.0.4 |
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%patch100 -p1 -b .rh |
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./autogen.sh |
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cd src/pm/hydra && ./autogen.sh && cd ../../.. |
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cd .. |
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%build |
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cd .. |
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%ifarch s390 |
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%global m_option -m31 |
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%else |
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%global m_option -m%{__isa_bits} |
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%endif |
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%ifarch %{arm} aarch64 |
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%global m_option "" |
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%endif |
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%global selected_channels ch3:nemesis |
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%ifarch %{ix86} x86_64 s390 %{arm} aarch64 |
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%global XFLAGS -fPIC |
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%endif |
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%global variant mpich-3.2 |
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%global libname %{variant} |
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%global namearch %{variant}-%{_arch} |
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cd mpich-3.2 |
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%configure \ |
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--enable-sharedlibs=gcc \ |
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--enable-shared \ |
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--enable-static=no \ |
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--enable-lib-depend \ |
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--disable-rpath \ |
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--disable-silent-rules \ |
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--enable-fc \ |
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--with-device=%{selected_channels} \ |
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--with-pm=hydra:gforker \ |
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--sysconfdir=%{_sysconfdir}/%{namearch} \ |
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--includedir=%{_includedir}/%{namearch} \ |
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--bindir=%{_libdir}/%{libname}/bin \ |
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--libdir=%{_libdir}/%{libname}/lib \ |
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--datadir=%{_datadir}/%{libname} \ |
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--mandir=%{_mandir}/%{libname} \ |
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--docdir=%{_docdir}/%{libname} \ |
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--with-hwloc-prefix=system \ |
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FC=%{opt_fc} \ |
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F77=%{opt_f77} \ |
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CFLAGS="%{m_option} %{optflags} %{?XFLAGS}" \ |
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CXXFLAGS="%{m_option} %{optflags} %{?XFLAGS}" \ |
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FCFLAGS="%{m_option} %{optflags} %{?XFLAGS}" \ |
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FFLAGS="%{m_option} %{optflags} %{?XFLAGS}" \ |
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LDFLAGS='-Wl,-z,noexecstack' \ |
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MPICH2LIB_CFLAGS="%{?opt_cc_cflags}" \ |
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MPICH2LIB_CXXFLAGS="%{optflags}" \ |
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MPICH2LIB_FCFLAGS="%{?opt_fc_fflags}" \ |
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MPICH2LIB_FFLAGS="%{?opt_f77_fflags}" |
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# MPICH2LIB_LDFLAGS='-Wl,-z,noexecstack' \ |
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# MPICH2_MPICC_FLAGS="%{m_option} -O2 %{?XFLAGS}" \ |
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# MPICH2_MPICXX_FLAGS="%{m_option} -O2 %{?XFLAGS}" \ |
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# MPICH2_MPIFC_FLAGS="%{m_option} -O2 %{?XFLAGS}" \ |
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# MPICH2_MPIF77_FLAGS="%{m_option} -O2 %{?XFLAGS}" |
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# --with-openpa-prefix=embedded \ |
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# FCFLAGS="%{?opt_fc_fflags} -I%{_fmoddir}/%{name} %{?XFLAGS}" \ |
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# Remove rpath |
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sed -i 's|^hardcode_libdir_flag_spec=.*|hardcode_libdir_flag_spec=""|g' libtool |
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sed -i 's|^runpath_var=LD_RUN_PATH|runpath_var=DIE_RPATH_DIE|g' libtool |
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make %{?_smp_mflags} V=1 |
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cd .. |
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%ifarch s390 |
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%global m_option -m31 |
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%else |
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%global m_option -m%{__isa_bits} |
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%endif |
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%ifarch %{arm} aarch64 |
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%global m_option "" |
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%endif |
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%ifarch %{ix86} x86_64 |
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%global selected_channels ch3:nemesis |
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%else |
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%global selected_channels ch3:sock |
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%endif |
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%ifarch %{ix86} x86_64 s390 %{arm} |
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%global XFLAGS -fPIC |
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%endif |
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%global variant mpich |
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%global libname %{variant} |
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%global namearch %{variant}-%{_arch} |
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cd mpich-3.0.4 |
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%configure \ |
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--enable-sharedlibs=gcc \ |
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--enable-shared \ |
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--enable-lib-depend \ |
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--disable-rpath \ |
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--enable-fc \ |
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--with-device=%{selected_channels} \ |
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--with-pm=hydra:gforker \ |
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--sysconfdir=%{_sysconfdir}/%{namearch} \ |
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--includedir=%{_includedir}/%{namearch} \ |
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--bindir=%{_libdir}/%{libname}/bin \ |
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--libdir=%{_libdir}/%{libname}/lib \ |
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--datadir=%{_datadir}/%{libname} \ |
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--mandir=%{_mandir}/%{libname} \ |
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--docdir=%{_docdir}/%{libname} \ |
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--with-hwloc-prefix=system \ |
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FC=%{opt_fc} \ |
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F77=%{opt_f77} \ |
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CFLAGS="%{m_option} %{optflags} %{?XFLAGS}" \ |
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CXXFLAGS="%{m_option} %{optflags} %{?XFLAGS}" \ |
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FCFLAGS="%{m_option} %{optflags} %{?XFLAGS}" \ |
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FFLAGS="%{m_option} %{optflags} %{?XFLAGS}" \ |
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LDFLAGS='-Wl,-z,noexecstack' \ |
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MPICH2LIB_CFLAGS="%{?opt_cc_cflags}" \ |
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MPICH2LIB_CXXFLAGS="%{optflags}" \ |
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MPICH2LIB_FCFLAGS="%{?opt_fc_fflags}" \ |
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MPICH2LIB_FFLAGS="%{?opt_f77_fflags}" |
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# MPICH2LIB_LDFLAGS='-Wl,-z,noexecstack' \ |
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# MPICH2_MPICC_FLAGS="%{m_option} -O2 %{?XFLAGS}" \ |
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# MPICH2_MPICXX_FLAGS="%{m_option} -O2 %{?XFLAGS}" \ |
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# MPICH2_MPIFC_FLAGS="%{m_option} -O2 %{?XFLAGS}" \ |
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# MPICH2_MPIF77_FLAGS="%{m_option} -O2 %{?XFLAGS}" |
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# --with-openpa-prefix=embedded \ |
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# FCFLAGS="%{?opt_fc_fflags} -I%{_fmoddir}/%{name} %{?XFLAGS}" \ |
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#make %{?_smp_mflags} doesn't work |
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make V=1 |
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cd .. |
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%install |
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cd .. |
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finish_install() { |
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local VARIANT="$1" |
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local LIBNAME="$VARIANT" |
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local NAMEARCH="$VARIANT-%{_arch}" |
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find %{buildroot}%{_libdir}/$LIBNAME/lib -name \*.la -delete |
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mkdir -p %{buildroot}/%{_fmoddir}/$NAMEARCH |
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mkdir -p %{buildroot}%{python_sitearch}/$LIBNAME |
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# Make the environment-modules file |
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mkdir -p %{buildroot}%{_sysconfdir}/modulefiles/mpi |
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sed "s#@LIBDIR@#%{_libdir}/$LIBNAME#g; |
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s#@ETCDIR@#%{_sysconfdir}/$NAMEARCH#g; |
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s#@FMODDIR@#%{_fmoddir}/$NAMEARCH#g; |
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s#@INCDIR@#%{_includedir}/$NAMEARCH#g; |
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s#@MANDIR@#%{_mandir}/$LIBNAME#g; |
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s#@PYSITEARCH@#%{python_sitearch}/$LIBNAME#g; |
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s#@COMPILER@#$NAMEARCH#g; |
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s#@SUFFIX@#_$LIBNAME#g" \ |
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< %SOURCE2 \ |
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> %{buildroot}%{_sysconfdir}/modulefiles/mpi/$NAMEARCH |
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|
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# Make the profile script for autoload |
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mkdir -p %{buildroot}%{_sysconfdir}/profile.d |
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cat << EOF > %{buildroot}%{_sysconfdir}/profile.d/$NAMEARCH.sh |
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# Load mpich environment module |
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module load mpi/$NAMEARCH |
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EOF |
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cp -p %{buildroot}%{_sysconfdir}/profile.d/$NAMEARCH.{sh,csh} |
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# Make the rpm macro file |
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mkdir -p %{buildroot}/%{_sysconfdir}/rpm |
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# do not expand _arch |
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sed "s#@MACRONAME@#${LIBNAME//[-.]/_}#g; |
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s#@MODULENAME@#$VARIANT-%%{_arch}#" \ |
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< %SOURCE1 \ |
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> %{buildroot}/%{_sysconfdir}/rpm/macros.$LIBNAME |
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} |
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cd mpich-3.2 |
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%make_install |
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cd .. |
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finish_install mpich-3.2 |
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cd mpich-3.0.4 |
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%make_install |
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cd .. |
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finish_install mpich |
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rm -f %{buildroot}%{_libdir}/mpich/lib/lib{*mpich*,opa,mpl}.a |
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ln -s mpich-%{_arch} %{buildroot}%{_sysconfdir}/modulefiles/mpi/mpich-3.0-%{_arch} |
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ln -s mpich-%{_arch} %{buildroot}%{_sysconfdir}/mpich-3.0-%{_arch} |
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# Silence rpmlint |
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sed -i '/^#! \//,1 d' %{buildroot}%{_sysconfdir}/mpich-%{_arch}/mpi*.conf |
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%global variant mpich-3.2 |
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%global libname %{variant} |
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%global namearch %{variant}-%{_arch} |
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|
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%files 3.2 |
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%defattr(-,root,root,-) |
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%doc CHANGES COPYRIGHT README RELEASE_NOTES |
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%dir %{_libdir}/%{libname} |
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%dir %{_libdir}/%{libname}/lib |
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%dir %{_libdir}/%{libname}/bin |
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%{_libdir}/%{libname}/lib/*.so.* |
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%{_libdir}/%{libname}/bin/hydra* |
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%{_libdir}/%{libname}/bin/mpichversion |
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%{_libdir}/%{libname}/bin/mpiexec* |
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%{_libdir}/%{libname}/bin/mpirun |
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%{_libdir}/%{libname}/bin/mpivars |
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%dir %{python_sitearch}/%{libname} |
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%dir %{_fmoddir}/%{namearch} |
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%{_libdir}/%{libname}/bin/parkill |
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%dir %{_mandir}/%{libname} |
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%dir %{_mandir}/%{libname}/man1 |
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%{_mandir}/%{libname}/man1/mpiexec* |
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%{_mandir}/%{libname}/man1/hydra* |
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%dir %{_sysconfdir}/modulefiles/mpi |
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%{_sysconfdir}/modulefiles/mpi/%{namearch} |
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|
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%files 3.2-autoload |
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%defattr(-,root,root,-) |
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%{_sysconfdir}/profile.d/%{namearch}.* |
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|
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%files 3.2-devel |
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%defattr(-,root,root,-) |
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%{_libdir}/%{libname}/bin/mpicc |
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%{_libdir}/%{libname}/bin/mpicxx |
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%{_libdir}/%{libname}/bin/mpic++ |
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%{_libdir}/%{libname}/bin/mpif* |
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%{_mandir}/%{libname}/man1/mpic* |
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%{_mandir}/%{libname}/man1/mpif* |
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%{_includedir}/%{namearch}/ |
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%{_libdir}/%{libname}/lib/*.so |
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%{_libdir}/%{libname}/lib/pkgconfig/ |
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%config %{_sysconfdir}/rpm/macros.%{libname} |
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|
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%files 3.2-doc |
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%defattr(-,root,root,-) |
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%{_docdir}/%{libname} |
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%{_mandir}/%{libname}/man3/ |
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%global variant mpich |
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%global libname %{variant} |
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%global namearch %{variant}-%{_arch} |
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%files 3.0 |
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%defattr(-,root,root,-) |
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%doc COPYRIGHT |
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%dir %{_libdir}/%{libname} |
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%dir %{_libdir}/%{libname}/lib |
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%dir %{_libdir}/%{libname}/bin |
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%{_libdir}/%{libname}/lib/*.so.* |
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%{_libdir}/%{libname}/bin/hydra* |
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%{_libdir}/%{libname}/bin/mpichversion |
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%{_libdir}/%{libname}/bin/mpiexec* |
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%{_libdir}/%{libname}/bin/mpirun |
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%dir %{python_sitearch}/%{libname} |
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%dir %{_fmoddir}/%{namearch} |
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%{_libdir}/%{libname}/bin/parkill |
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%dir %{_mandir}/%{libname} |
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%dir %{_mandir}/%{libname}/man1 |
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%{_mandir}/%{libname}/man1/mpiexec* |
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%dir %{_sysconfdir}/modulefiles/mpi |
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%{_sysconfdir}/modulefiles/mpi/%{namearch} |
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%{_sysconfdir}/modulefiles/mpi/mpich-3.0-%{_arch} |
|
|
|
%files 3.0-autoload |
|
%defattr(-,root,root,-) |
|
%{_sysconfdir}/profile.d/%{namearch}.* |
|
|
|
%files 3.0-devel |
|
%defattr(-,root,root,-) |
|
%{_libdir}/%{libname}/bin/mpicc |
|
%{_libdir}/%{libname}/bin/mpicxx |
|
%{_libdir}/%{libname}/bin/mpic++ |
|
%{_libdir}/%{libname}/bin/mpif* |
|
%{_mandir}/%{libname}/man1/mpic* |
|
%{_mandir}/%{libname}/man1/mpif* |
|
%config %{_sysconfdir}/%{namearch}/ |
|
%{_sysconfdir}/mpich-3.0-%{_arch} |
|
%{_includedir}/%{namearch}/ |
|
%{_libdir}/%{libname}/lib/*.so |
|
%{_libdir}/%{libname}/lib/pkgconfig/ |
|
%config %{_sysconfdir}/rpm/macros.%{libname} |
|
|
|
%files 3.0-doc |
|
%defattr(-,root,root,-) |
|
%{_docdir}/%{libname} |
|
%{_mandir}/%{libname}/man3/ |
|
|
|
%changelog |
|
* Fri Jul 29 2016 Michal Schmidt <mschmidt@redhat.com> - 3.2-2 |
|
- Remove bad rpath in two binaries in mpich-3.2. |
|
- Restore trimming of shebang lines in config files in mpich-3.0-devel. |
|
- Related: rhbz1091532 |
|
|
|
* Wed Jun 22 2016 Michal Schmidt <mschmidt@redhat.com> - 3.2-1 |
|
- Update to upstream version mpich-3.2 with patches from Fedora. |
|
- Keep 3.0.4 as 'mpich-3.0' for backwards compatibility. |
|
- Resolves: rhbz1091532 |
|
- Resolves: rhbz1142117 |
|
- Resolves: rhbz1148992 |
|
|
|
* Wed Sep 10 2014 Yaakov Selkowitz <yselkowi@redhat.com> - 3.0.4-8 |
|
- Do not use -m64 on AArch64 |
|
Resolves: rhbz1077315 |
|
|
|
* Mon Mar 3 2014 Jay Fenlason <fenlason@redhat.com> - 3.0.4-7 |
|
- Update build flags to fix |
|
Resolves: rhbz1070778 |
|
|
|
* Fri Jan 24 2014 Daniel Mach <dmach@redhat.com> - 3.0.4-6 |
|
- Mass rebuild 2014-01-24 |
|
|
|
* Fri Dec 27 2013 Daniel Mach <dmach@redhat.com> - 3.0.4-5 |
|
- Mass rebuild 2013-12-27 |
|
|
|
* Fri Oct 4 2013 Jay Fenlason <fenlason@redhat.com> 3.0.4-4.el7 |
|
- Fix the module file to contain all the definitions we expect. |
|
Resolves: rhbz1001469 |
|
|
|
* Wed Oct 2 2013 Jay Fenlason <fenlason@redhat.com> 3.0.4-3.el7 |
|
- Fix macros.mpich |
|
Resolves: rhbz1001469 |
|
|
|
* Fri Sep 6 2013 Jay Fenlason <fenlason@redhat.com> 3.0.4-1.el7 |
|
- Initial import for RHEL, using sanitized source tarball. |
|
|
|
|