base/SOURCES/BZ-1213602-overlayfs-workaround-plugin.patch

commit 0c0b029122b476c269a4b560d9be558e69e054ae
Author: Valentina Mukhamedzhanova <vmukhame@redhat.com>
Date:   Thu Jun 25 12:09:52 2015 +0200

    Add plugin for overlayfs issue workaround. Patch by Pavel Odvody. BZ#1213602

diff --git a/plugins/ovl/ovl.conf b/plugins/ovl/ovl.conf
new file mode 100644
index 0000000..8e4d76c
--- /dev/null
+++ b/plugins/ovl/ovl.conf
@@ -0,0 +1,2 @@
+[main]
+enabled=1
diff --git a/plugins/ovl/ovl.py b/plugins/ovl/ovl.py
new file mode 100644
index 0000000..de34081
--- /dev/null
+++ b/plugins/ovl/ovl.py
@@ -0,0 +1,48 @@
+# Copyright (C) 2015  Red Hat, Inc.
+#
+# Authors: Pavel Odvody <podvody@redhat.com>
+#
+# This copyrighted material is made available to anyone wishing to use,
+# modify, copy, or redistribute it subject to the terms and conditions of
+# the GNU General Public License v.2, or (at your option) any later version.
+# This program is distributed in the hope that it will be useful, but WITHOUT
+# ANY WARRANTY expressed or implied, including the implied warranties of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU General
+# Public License for more details.  You should have received a copy of the
+# GNU General Public License along with this program; if not, write to the
+# Free Software Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA
+# 02110-1301, USA.  Any Red Hat trademarks that are incorporated in the
+# source code or documentation are not subject to the GNU General Public
+# License and may only be used or replicated with the express permission of
+# Red Hat, Inc.
+
+from yum.plugins import TYPE_CORE
+from os import utime, walk, path
+
+requires_api_version = '2.3'
+plugin_type = (TYPE_CORE,)
+base_dir = 'var/lib/rpm/'
+mtab = '/etc/mtab'
+
+def should_touch():
+        """ 
+        Touch the files only once we've verified that
+        we're on overlay mount
+        """
+        with open(mtab, 'r') as f:
+                line = f.readline()
+                return line and line.startswith('overlay /')
+        return False
+
+def init_hook(conduit):
+        if not should_touch():
+                return
+    ir = conduit.getConf().installroot
+        try:
+                for root, _, files in walk(path.join(ir, base_dir)):
+                        for f in files:
+                                p = path.join(root, f)
+                                with open(p, 'a'):
+                                        utime(p, None)
+        except Exception as e:
+                conduit.error(1, "Error while doing RPMdb copy-up:\n%s" % e)
commit 1555cfa6465e6e31515a86f097c8993d89c0085e
Author: Valentina Mukhamedzhanova <vmukhame@redhat.com>
Date:   Thu Jun 25 12:30:13 2015 +0200

    ovl plugin: fix indentation

diff --git a/plugins/ovl/ovl.py b/plugins/ovl/ovl.py
index de34081..eda784e 100644
--- a/plugins/ovl/ovl.py
+++ b/plugins/ovl/ovl.py
@@ -25,24 +25,24 @@ base_dir = 'var/lib/rpm/'
 mtab = '/etc/mtab'
 
 def should_touch():
-        """ 
-        Touch the files only once we've verified that
-        we're on overlay mount
-        """
-        with open(mtab, 'r') as f:
-                line = f.readline()
-                return line and line.startswith('overlay /')
-        return False
+    """ 
+    Touch the files only once we've verified that
+    we're on overlay mount
+    """
+    with open(mtab, 'r') as f:
+        line = f.readline()
+        return line and line.startswith('overlay /')
+    return False
 
 def init_hook(conduit):
-        if not should_touch():
-                return
+    if not should_touch():
+        return
     ir = conduit.getConf().installroot
-        try:
-                for root, _, files in walk(path.join(ir, base_dir)):
-                        for f in files:
-                                p = path.join(root, f)
-                                with open(p, 'a'):
-                                        utime(p, None)
-        except Exception as e:
-                conduit.error(1, "Error while doing RPMdb copy-up:\n%s" % e)
+    try:
+        for root, _, files in walk(path.join(ir, base_dir)):
+            for f in files:
+                p = path.join(root, f)
+                with open(p, 'a'):
+                    utime(p, None)
+    except Exception as e:
+        conduit.error(1, "Error while doing RPMdb copy-up:\n%s" % e)
commit 617d2d90a553f9e5bc4dfd9ab2f9c194b956fcab
Author: Valentina Mukhamedzhanova <vmukhame@redhat.com>
Date:   Thu Jun 25 12:53:39 2015 +0200

    ovl plugin: get rpmdbpath from conduit

diff --git a/plugins/ovl/ovl.py b/plugins/ovl/ovl.py
index eda784e..f2fbdd4 100644
--- a/plugins/ovl/ovl.py
+++ b/plugins/ovl/ovl.py
@@ -21,7 +21,6 @@ from os import utime, walk, path
 
 requires_api_version = '2.3'
 plugin_type = (TYPE_CORE,)
-base_dir = 'var/lib/rpm/'
 mtab = '/etc/mtab'
 
 def should_touch():
@@ -34,12 +33,12 @@ def should_touch():
         return line and line.startswith('overlay /')
     return False
 
-def init_hook(conduit):
+def prereposetup_hook(conduit):
     if not should_touch():
         return
-    ir = conduit.getConf().installroot
+    rpmdb_path = conduit.getRpmDB()._rpmdbpath
     try:
-        for root, _, files in walk(path.join(ir, base_dir)):
+        for root, _, files in walk(rpmdb_path):
             for f in files:
                 p = path.join(root, f)
                 with open(p, 'a'):
commit 5cd70d30bcdbd544e086a1aa3e7522c89bbd893a
Author: Valentina Mukhamedzhanova <vmukhame@redhat.com>
Date:   Tue Aug 4 12:00:37 2015 +0200

    ovl plugin: change copy-up strategy, execute when root fs is mounted OverlayFS, add logging. Patch by Pavel Odvody.

diff --git a/plugins/ovl/ovl.py b/plugins/ovl/ovl.py
index f2fbdd4..8dd0a9e 100644
--- a/plugins/ovl/ovl.py
+++ b/plugins/ovl/ovl.py
@@ -1,47 +1,93 @@
-# Copyright (C) 2015  Red Hat, Inc.
-#
-# Authors: Pavel Odvody <podvody@redhat.com>
-#
-# This copyrighted material is made available to anyone wishing to use,
-# modify, copy, or redistribute it subject to the terms and conditions of
-# the GNU General Public License v.2, or (at your option) any later version.
-# This program is distributed in the hope that it will be useful, but WITHOUT
-# ANY WARRANTY expressed or implied, including the implied warranties of
-# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU General
-# Public License for more details.  You should have received a copy of the
-# GNU General Public License along with this program; if not, write to the
-# Free Software Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA
-# 02110-1301, USA.  Any Red Hat trademarks that are incorporated in the
-# source code or documentation are not subject to the GNU General Public
-# License and may only be used or replicated with the express permission of
-# Red Hat, Inc.
-
 from yum.plugins import TYPE_CORE
-from os import utime, walk, path
+from os import walk, path, fstat
 
 requires_api_version = '2.3'
 plugin_type = (TYPE_CORE,)
 mtab = '/etc/mtab'
 
+
+def _stat_ino_fp(fp):
+    """
+    Get the inode number from file descriptor
+    """
+    return fstat(fp.fileno()).st_ino
+
+
+def get_file_list(rpmpath):
+    """
+    Enumerate all files in a directory
+    """
+    for root, _, files in walk(rpmpath):
+        for f in files:
+            yield path.join(root, f)
+
+
+def for_each_file(files, cb, m='rb'):
+    """
+    Open each file with mode specified in `m`
+    and invoke `cb` on each of the file objects
+    """
+    if not files or not cb:
+        return []
+    ret = []
+    for f in files:
+        with open(f, m) as fp:
+            ret.append(cb(fp))
+    return ret
+
+
+def do_detect_copy_up(files):
+    """
+    Open the files first R/O, then R/W and count unique
+    inode numbers
+    """
+    num_files = len(files)
+    lower = for_each_file(files, _stat_ino_fp, 'rb')
+    upper = for_each_file(files, _stat_ino_fp, 'ab')
+    diff = set(lower + upper)
+    return len(diff) - num_files
+
+
+def raw_copy_up(files):
+    """
+    Induce a copy-up by opening R/W
+    """
+    return for_each_file(files, _stat_ino_fp, 'ab')
+
+
+def should_be_verbose(cmd):
+    """
+    If the debuglevel is > 2 then be verbose
+    """
+    if not hasattr(cmd, 'debuglevel'):
+        return False
+    return cmd.debuglevel > 2
+
+
 def should_touch():
     """ 
     Touch the files only once we've verified that
     we're on overlay mount
     """
+    if not path.exists(mtab):
+        return False
     with open(mtab, 'r') as f:
         line = f.readline()
-        return line and line.startswith('overlay /')
+        return line.startswith('overlay / overlay')
     return False
 
+
 def prereposetup_hook(conduit):
     if not should_touch():
         return
+
     rpmdb_path = conduit.getRpmDB()._rpmdbpath
+
     try:
-        for root, _, files in walk(rpmdb_path):
-            for f in files:
-                p = path.join(root, f)
-                with open(p, 'a'):
-                    utime(p, None)
+        files = list(get_file_list(rpmdb_path))
+        if should_be_verbose(conduit.getCmdLine()[0]):
+            conduit.info(1, "ovl: Copying up (%i) files from OverlayFS lower layer" % do_detect_copy_up(files))
+        else:
+            raw_copy_up(files)
     except Exception as e:
-        conduit.error(1, "Error while doing RPMdb copy-up:\n%s" % e)
+        conduit.error(1, "ovl: Error while doing RPMdb copy-up:\n%s" % e)
commit 11e4a7386e2e351e0ff5f8d89663eb66220a6100
Author: Valentina Mukhamedzhanova <vmukhame@redhat.com>
Date:   Tue Aug 4 12:18:49 2015 +0200

    ovl plugin: remove redundant debuglevel check

diff --git a/plugins/ovl/ovl.py b/plugins/ovl/ovl.py
index 8dd0a9e..400d3c7 100644
--- a/plugins/ovl/ovl.py
+++ b/plugins/ovl/ovl.py
@@ -4,6 +4,7 @@ from os import walk, path, fstat
 requires_api_version = '2.3'
 plugin_type = (TYPE_CORE,)
 mtab = '/etc/mtab'
+VERBOSE_DEBUGLEVEL = 3
 
 
 def _stat_ino_fp(fp):
@@ -48,22 +49,6 @@ def do_detect_copy_up(files):
     return len(diff) - num_files
 
 
-def raw_copy_up(files):
-    """
-    Induce a copy-up by opening R/W
-    """
-    return for_each_file(files, _stat_ino_fp, 'ab')
-
-
-def should_be_verbose(cmd):
-    """
-    If the debuglevel is > 2 then be verbose
-    """
-    if not hasattr(cmd, 'debuglevel'):
-        return False
-    return cmd.debuglevel > 2
-
-
 def should_touch():
     """ 
     Touch the files only once we've verified that
@@ -85,9 +70,7 @@ def prereposetup_hook(conduit):
 
     try:
         files = list(get_file_list(rpmdb_path))
-        if should_be_verbose(conduit.getCmdLine()[0]):
-            conduit.info(1, "ovl: Copying up (%i) files from OverlayFS lower layer" % do_detect_copy_up(files))
-        else:
-            raw_copy_up(files)
+        copied_num = do_detect_copy_up(files)
+        conduit.info(VERBOSE_DEBUGLEVEL, "ovl: Copying up (%i) files from OverlayFS lower layer" % copied_num)
     except Exception as e:
         conduit.error(1, "ovl: Error while doing RPMdb copy-up:\n%s" % e)
commit 6f43c2e1aff0ee0746685778544f7b05d2ef78a1
Author: Pavel Odvody <podvody@redhat.com>
Date:   Thu Sep 3 18:09:58 2015 +0200

    Add manpage, remove file-system check

diff --git a/docs/yum-ovl.1 b/docs/yum-ovl.1
new file mode 100644
index 0000000..ddfbfab
--- /dev/null
+++ b/docs/yum-ovl.1
@@ -0,0 +1,22 @@
+.TH "yum\-ovl" "1" "September 2015" "Red Hat" "User Manual"
+.
+.SH "NAME"
+yum\-ovl \- Performs an initial copy\-up of yum(8) package database\.
+.
+.SH "OPTIONS"
+\fB\-d\fR \fIdebug\-level\fR If debug level is \fI2\fR and more, print out the number of files copied up from the lower layer
+.
+.SH "FILES"
+\fI/usr/lib/yum\-plugins/ovl\.py\fR Plugin itself
+.
+.P
+\fI/etc/yum/pluginconf\.d/ovl\.conf\fR Configuration file allowing to enable/disable the plugin
+.
+.SH "AUTHOR"
+Pavel Odvody \fIpodvody@redhat\.com\fR
+.
+.SH "LICENSE"
+2015, Red Hat, Licensed under GPLv2+
+.
+.SH "SEE ALSO"
+yum(1) yum(8)
diff --git a/plugins/ovl/ovl.py b/plugins/ovl/ovl.py
index 400d3c7..3d547ed 100644
--- a/plugins/ovl/ovl.py
+++ b/plugins/ovl/ovl.py
@@ -3,7 +3,6 @@ from os import walk, path, fstat
 
 requires_api_version = '2.3'
 plugin_type = (TYPE_CORE,)
-mtab = '/etc/mtab'
 VERBOSE_DEBUGLEVEL = 3
 
 
@@ -49,23 +48,7 @@ def do_detect_copy_up(files):
     return len(diff) - num_files
 
 
-def should_touch():
-    """ 
-    Touch the files only once we've verified that
-    we're on overlay mount
-    """
-    if not path.exists(mtab):
-        return False
-    with open(mtab, 'r') as f:
-        line = f.readline()
-        return line.startswith('overlay / overlay')
-    return False
-
-
 def prereposetup_hook(conduit):
-    if not should_touch():
-        return
-
     rpmdb_path = conduit.getRpmDB()._rpmdbpath
 
     try:
commit 3980742eb6477c5bd5366222fb033cfc5c95d260
Author: Pavel Odvody <podvody@redhat.com>
Date:   Fri Sep 4 10:38:32 2015 +0200

    Added manpage description and reference to rpmdb

diff --git a/docs/yum-ovl.1 b/docs/yum-ovl.1
index ddfbfab..33e0dfb 100644
--- a/docs/yum-ovl.1
+++ b/docs/yum-ovl.1
@@ -6,6 +6,21 @@ yum\-ovl \- Performs an initial copy\-up of yum(8) package database\.
 .SH "OPTIONS"
 \fB\-d\fR \fIdebug\-level\fR If debug level is \fI2\fR and more, print out the number of files copied up from the lower layer
 .
+.SH "DESCRIPTION"
+Opening a file on OverlayFS in read\-only mode causes the file from
+.br
+lower layer to be opened, then later on, if the same file is opened 
+.br
+in write mode, a copy-up into the upper    layer    takes    place, 
+.br
+resulting into a \fBnew\fR file being opened\.
+.br
+Since yum(8) needs to open the \fBRPMdb\fR first read-only, and then
+.br
+also with write access, we need to copy-up the files beforehand to 
+.br
+make sure that the access is consistent.
+.
 .SH "FILES"
 \fI/usr/lib/yum\-plugins/ovl\.py\fR Plugin itself
 .
@@ -19,4 +34,4 @@ Pavel Odvody \fIpodvody@redhat\.com\fR
 2015, Red Hat, Licensed under GPLv2+
 .
 .SH "SEE ALSO"
-yum(1) yum(8)
+yum(1) yum(8) rpmdb(8)
diff -up yum-utils-1.1.31/docs/Makefile.old yum-utils-1.1.31/docs/Makefile
--- yum-utils-1.1.31/docs/Makefile.old	2015-09-04 17:10:03.460207371 +0200
+++ yum-utils-1.1.31/docs/Makefile	2015-09-04 17:10:19.167260413 +0200
@@ -3,7 +3,7 @@ DOCS = repoquery package-cleanup repo-rs
        yum-groups-manager debuginfo-install repodiff yum-fs-snapshot \
        show-installed show-changed-rco yum-debug-restore \
        find-repos-of-install needs-restarting repo-graph repoclosure \
-       repomanage repotrack verifytree yum-config-manager
+       repomanage repotrack verifytree yum-config-manager yum-ovl
 DOCS5 = yum-changelog.conf yum-versionlock.conf yum-fs-snapshot.conf
 DOCS8 = yum-complete-transaction yumdb
 
commit d03fce57c1fa3f9dff6fdd9867cbcaf66df9f841
Author: Valentina Mukhamedzhanova <vmukhame@redhat.com>
Date:   Fri Oct 9 15:16:33 2015 +0200

    ovl plugin: run at init_hook stage

diff --git a/plugins/ovl/ovl.py b/plugins/ovl/ovl.py
index 3d547ed..fe27022 100644
--- a/plugins/ovl/ovl.py
+++ b/plugins/ovl/ovl.py
@@ -47,9 +47,8 @@ def do_detect_copy_up(files):
     diff = set(lower + upper)
     return len(diff) - num_files
 
-
-def prereposetup_hook(conduit):
-    rpmdb_path = conduit.getRpmDB()._rpmdbpath
+def init_hook(conduit):
+    rpmdb_path = conduit._base.rpmdb._rpmdbpath
 
     try:
         files = list(get_file_list(rpmdb_path))